BioBuntu is a comprehensive platform for running genomic analysis pipelines with CLI, GUI, and web interfaces. Perfect for researchers, labs, and bioinformatics teams.

How do I install BioBuntu?

You can install BioBuntu from the PyPI by searching for 'BioBuntu' or using the command 'pip install biobuntu' in CMD

What features does BioBuntu offer?

Project Management: Create and manage bioinformatics projects with organized directory structures, Advanced Pipelines: Support for complex workflows with dependencies and parallel execution, Multiple Interfaces: CLI, Desktop GUI (BioBuntu Studio), and Web Dashboard, Remote Lab Support: API endpoints for remote pipeline execution with job tracking, Packaging: Available as .deb packages, PPA, and Conda packages, Workflow Support: RNA-seq, variant calling, metagenomics, and QC pipelines, Tool Integration: Wrappers for FastQC, BWA, GATK, HISAT2, Samtools

What are the system requirements for BioBuntu?

BioBuntu is platform independent. It supports Windows, macOS, and Linux.

How do I update BioBuntu?

BioBuntu updates by pip install biobuntu==1.2.4 --upgrade in CMD

How do I report bugs or request features?

Report bugs or request features through GitHub Issues at https://github.com/biobuntu/biobuntu/issues. Include detailed steps to reproduce any issues.

Blogs

Hello World — BioBuntu launch notes
Published: 2026-02-12